IthaID: 3993
Names and Sequences
| Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
|---|---|---|---|
| Common Name: | CD 90 AAG>AAT [Lys>Asn] | HGVS Name: | HBA1:c.273G>T |
| Hb Name: | Hb Guigang | Protein Info: | N/A |
Context nucleotide sequence:
CCCTGAGCGACCTGCACGCGCACAA [G>T] CTTCGGGTGGACCCGGTCAACTTCA (Strand: +)
Protein sequence:
MVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHNLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
Also known as:
Comments: The c.273G>T (p.Lys90Asn) is a missense variant in the HBA1 gene that results in the substitution of lysine (AAG) with asparagine (AAT) at codon 90. The abnormal Hb variant can be separated and quantified by CE. It was first detected in a heterozygous state in a Chinese proband with normal hematological parameters and clinical phenotype.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
No available links
Phenotype
| Hemoglobinopathy Group: | Structural Haemoglobinopathy |
|---|---|
| Hemoglobinopathy Subgroup: | α-chain variant |
| Allele Phenotype: | N/A |
| Stability: | N/A |
| Oxygen Affinity: | N/A |
| Associated Phenotypes: | N/A |
Location
| Chromosome: | 16 |
|---|---|
| Locus: | NG_000006.1 |
| Locus Location: | 37969 |
| Size: | 1 bp |
| Located at: | α1 |
| Specific Location: | Exon 2 |
Other details
| Type of Mutation: | Point-Mutation(Substitution) |
|---|---|
| Effect on Gene/Protein Function: | Missense codons (Protein Structure) |
| Ethnic Origin: | Chinese |
| Molecular mechanism: | N/A |
| Inheritance: | Recessive |
| DNA Sequence Determined: | No |
In silico pathogenicity prediction
Sequence Viewer
Publications / Origin
- Gan G, Li W, Huang J, Zheng L, Li T, Li Y, Hb Guigang [α90 (FG2)Lys→Asn; HBA1:c.273G˃T]: a Novel α-Globin Chain Variant., Clin Lab, 70(7), 0, 2024 PubMed
Microattributions
| A/A | Contributor(s) | Date | Comments |
|---|---|---|---|
| 1 | Li, Youqiong | 2022-12-19 | First report. |
| A/A | Date | Curator(s) | Comments |
|---|---|---|---|
| 1 | 2023-01-02 15:24:53 | The IthaGenes Curation Team | Created |
| 2 | 2023-01-02 15:36:35 | The IthaGenes Curation Team | Reviewed. Microattribution |
| 3 | 2023-01-02 16:39:26 | The IthaGenes Curation Team | Reviewed. Text added. |
| 4 | 2023-01-02 16:40:00 | The IthaGenes Curation Team | Reviewed. |
| 5 | 2024-08-02 11:32:44 | The IthaGenes Curation Team | Reviewed. Reference added, comment updated |