IthaID: 365
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
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Common Name: | -α3.7;CD 31 AGG>--G | HGVS Name: | NG_000006.1:g.[33869_33870del;34247_38050del] |
Hb Name: | N/A | Protein Info: | N/A |
Also known as:
Comments: The 2 nucleotide deletion c.94_95delAG was found on a chromosome that carries the -3.7 kb deletion (-α3.7) [IthaD:300]. The deletion of 'AG' on codon 31 in exon 1 creates a frameshift and premature truncation of the α-globin protein after 25 amino acids (p.Arg31AspfsX25) at codon 55. The in cis variation presented with mild hypochromic microcytic anaemia consistent with α-thalassaemia trait in the heterozygous state and with HbH disease in the presence of Hb G-Philadelphia [IthaID:596]. HGVS name reports deletion breakpoints in -α3.7 (type I) [IthaID: 300] and should be used with caution.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
Phenotype
Hemoglobinopathy Group: | Thalassaemia |
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Hemoglobinopathy Subgroup: | α-thalassaemia |
Allele Phenotype: | α⁺ |
Associated Phenotypes: | N/A |
Location
Chromosome: | 16 |
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Locus: | NG_000006.1 |
Locus Location: | 33869 or 34247 |
Size: | 2 bp or 3.804 kb |
Located at: | α2, α3.7 hybrid |
Other details
Type of Mutation: | Combination |
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Ethnic Origin: | American Black |
Molecular mechanism: | Altered α1β1 interface |
Inheritance: | Recessive |
DNA Sequence Determined: | Yes |
In silico pathogenicity prediction
Sequence Viewer
Publications / Origin
- Rieder RF, Woodbury DH, Rucknagel DL, The interaction of alpha-thalassaemia and haemoglobin G Philadelphia., Br J Haematol, 32(2), 159-65, 1976 PubMed
- Sancar GB, Tatsis B, Cedeno MM, Rieder RF, Proportion of hemoglobin G Philadelphia (alpha 268 Asn leads to Lys beta 2) in heterozygotes is determined by alpha-globin gene deletions., Proc Natl Acad Sci U S A, 77(11), 6874-8, 1980 PubMed
- Safaya S, Rieder RF, Dysfunctional alpha-globin gene in hemoglobin H disease in blacks. A dinucleotide deletion produces a frameshift and a termination codon., The Journal of biological chemistry, 263(9), 4328-32, 1988 PubMed
- Zhao P, Buller-Burckle AM, Peng M, Anderson A, Han ZJ, Gallivan MV, Secondary mutation (c.94_95delAG) in a -α3.7 allele associated with Hb H disease in two unrelated African American individuals homozygous for the -α(3.7) deletion (-α3.7/-α3.7T)., Hemoglobin , 36(1), 103-7, 2012 PubMed
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2010-06-16 16:13:15 | The IthaGenes Curation Team | Created |
2 | 2013-10-15 17:28:32 | The IthaGenes Curation Team | Reviewed. |
3 | 2014-06-04 10:45:19 | The IthaGenes Curation Team | Reviewed. HbVar link added. |
4 | 2014-06-04 10:46:27 | The IthaGenes Curation Team | Reviewed. Variation size corrected. |
5 | 2014-10-20 10:02:20 | The IthaGenes Curation Team | Reviewed. |
6 | 2022-02-25 17:42:27 | The IthaGenes Curation Team | Reviewed. HGVS and allele phenotype corrected. Comment and references added. |
7 | 2022-02-25 18:03:24 | The IthaGenes Curation Team | Reviewed. Affected gene corrected. |
8 | 2022-02-25 18:10:26 | The IthaGenes Curation Team | Reviewed. |
9 | 2024-03-06 11:54:07 | The IthaGenes Curation Team | Reviewed. Common and HGVS name corrected; Comment edited; Locations and Reference added, |
10 | 2024-03-06 11:58:34 | The IthaGenes Curation Team | Reviewed. Links added |
11 | 2024-03-06 14:05:46 | The IthaGenes Curation Team | Reviewed. Gene |
12 | 2024-03-06 14:06:30 | The IthaGenes Curation Team | Reviewed. |
13 | 2024-03-06 15:00:58 | The IthaGenes Curation Team | Reviewed. |
14 | 2024-03-06 15:03:23 | The IthaGenes Curation Team | Reviewed. |
15 | 2024-03-08 10:56:53 | The IthaGenes Curation Team | Reviewed. Comment updated |