IthaID: 189
Names and Sequences
| Functionality: | Globin gene causative mutation | Pathogenicity: | Pathogenic / Likely Pathogenic |
|---|---|---|---|
| Common Name: | CD 88 (+T) | HGVS Name: | HBB:c.266dupT |
| Hb Name: | N/A | Protein Info: | β 88(+T); modified C-terminal sequence: (88)Leu-(89)Glu-COOH |
| Also known as: |
We follow the
HGVS sequence variant nomenclature
and
IUPAC standards.
Context nucleotide sequence:
ACCTCAAGGGCACCTTTGCCACACT [-/T] GAGTGAGCTGCACTGTGACAAGCTG (Strand: -)
Comments: Found in a heterozygous state in one person of Asian Indian origin. The insertion of a nt T in codon 88 creates a shift in the reading frame with a premature stop codon at codon 90 (TGA).
Phenotype
| Hemoglobinopathy Group: | Thalassaemia |
|---|---|
| Hemoglobinopathy Subgroup: | β-thalassaemia |
| Allele Phenotype: | β0 |
| Associated Phenotypes: |
Haemolytic anaemia [HP:0001878] Ineffective erythropoiesis [HP:0010972] |
Location
| Chromosome: | 11 |
|---|---|
| Locus: | NG_000007.3 |
| Locus Location: | 70990 |
| Size: | 1 bp |
| Located at: | β |
| Specific Location: | Exon 2 |
Other details
| Type of Mutation: | Point-Mutation(Insertion) |
|---|---|
| Effect on Gene/Protein Function: | Frameshift (Translation) |
| Ethnic Origin: | Asian Indian |
| Molecular mechanism: | N/A |
| Inheritance: | Recessive |
| DNA Sequence Determined: | No |
In silico pathogenicity prediction
Sequence Viewer
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Frequencies
Publications / Origin
- Varawalla NY, Old JM, Weatherall DJ, Rare beta-thalassaemia mutations in Asian indians., British journal of haematology, 79(4), 640-4, 1991 PubMed
Created on 2010-06-16 16:13:15,
Last reviewed on 2019-11-13 14:04:55 (Show full history)
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