IthaID: 565
Names and Sequences
| Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
|---|---|---|---|
| Common Name: | CD 56 AAG>AGG [Lys>Arg] | HGVS Name: | HBA1:c.170A>G | HBA2:c.170A>G |
| Hb Name: | Hb Port Huron | Protein Info: | α2 or α1 56(E5) Lys>Arg |
Context nucleotide sequence:
CTGAGCCACGGCTCTGCCCAGGTTA [A/C/G] GGGCCACGGCAAGAAGGTGGCCGAC (Strand: +)
Protein sequence:
MVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVRGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
Also known as:
We follow the HGVS sequence variant nomenclature and IUPAC standards.
Phenotype
| Hemoglobinopathy Group: | Structural Haemoglobinopathy |
|---|---|
| Hemoglobinopathy Subgroup: | α-chain variant |
| Allele Phenotype: | N/A |
| Stability: | N/A |
| Oxygen Affinity: | N/A |
| Associated Phenotypes: | N/A |
Location
| Chromosome: | 16 |
|---|---|
| Locus: | NG_000006.1 |
| Locus Location: | 34062 or 37866 |
| Size: | 1 bp or 1 bp |
| Located at: | α1 or α2 |
| Specific Location: | Exon 2 |
Other details
| Type of Mutation: | Point-Mutation(Substitution) |
|---|---|
| Effect on Gene/Protein Function: | Missense codons (Protein Structure) |
| Ethnic Origin: | African-American |
| Molecular mechanism: | N/A |
| Inheritance: | Recessive |
| DNA Sequence Determined: | No |
In silico pathogenicity prediction
Publications / Origin
- Zwerdling T, Williams S, Nasr SA, Rucknagel DL, Hb Port Huron [alpha 56 (E5)Lys----ARG]: a new alpha chain variant., Hemoglobin , 15(5), 381-91, 1991
Created on 2010-06-16 16:13:15,
Last reviewed on 2014-03-28 14:41:00 (Show full history)
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