IthaID: 4120
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
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Common Name: | --LB | HGVS Name: | NC_000016.10:g.(?_47217)_(181171_206303)del |
Hb Name: | N/A | Protein Info: | N/A |
Also known as:
Comments: Found in a 20-year-old Chinese male presented with microcytic hypochromatosis. The deletion was detected by MLPA analysis and removed the entire HBA2, HBA1, HBQ and HBZ gene, as well as the major regulatory element HS-40, resulting in the loss of more than 134 kb from the a-globin chain. The exact breakpoints were not determined, as MLPA failed to identify an upstream break location. Pedigree analysis revealed that the proband inherited the novel deletion from his father.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
No available links
Phenotype
Hemoglobinopathy Group: | Thalassaemia |
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Hemoglobinopathy Subgroup: | α-thalassaemia |
Allele Phenotype: | α0 |
Associated Phenotypes: | N/A |
Other details
Type of Mutation: | Deletion |
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Ethnic Origin: | Chinese |
Molecular mechanism: | N/A |
Inheritance: | Recessive |
DNA Breakpoint Determined: | No |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
- Ye LH, Huang YY, Zhu ZT, Jiang AQ, Shen XL, Liang L, Li YQ, α-Thalassemia Caused by a Novel α-Globin Gene Cluster Deletion (-) Found in a Chinese Family., Hemoglobin, 48(5), 341-345, 2024
Created on 2025-01-10 10:24:36,
Last reviewed on 2025-01-10 10:33:04 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2025-01-10 10:24:36 | The IthaGenes Curation Team | Created |
2 | 2025-01-10 10:33:04 | The IthaGenes Curation Team | Reviewed. Allele Phenotype added. |
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IthaGenes was last updated on 2025-01-20 08:58:57