IthaID: 410
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
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Common Name: | -α3.7;CD 125 CTG>CAG [Leu>Gln] | HGVS Name: | N/A |
Hb Name: | N/A | Protein Info: | N/A |
Also known as:
Comments: The missense variant CD125 CTG>CAG [Leu>Gln] was found on a chromosome that carries the -3.7 kb deletion (-α3.7). Not clear whether it occurred on the HBA2 or HBA1 gene, nor which of the various -α3.7 deletion types [SALSA MLPA Probemix P140 HBA]. Another study located the CD 125 CTG>CAG change in exon 3 of HBA2, named Hb Westeinde [IthaID: 736].
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
Phenotype
Hemoglobinopathy Group: | Thalassaemia |
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Hemoglobinopathy Subgroup: | α-thalassaemia |
Allele Phenotype: | α0 |
Associated Phenotypes: | Haemolytic anaemia [HP:0001878] |
Location
Chromosome: | 16 |
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Locus: | NG_000006.1 |
Locus Location: | N/A |
Size: | 1 bp |
Located at: | α1 or α2, α3.7 hybrid |
Other details
Type of Mutation: | Combination |
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Ethnic Origin: | Turkish Jewish |
Molecular mechanism: | N/A |
Inheritance: | Recessive |
DNA Sequence Determined: | Yes |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
- Oron-Karni V, Filon D, Shifrin Y, Fried E, Pogrebijsky G, Oppenheim A, Rund D, Diversity of alpha-globin mutations and clinical presentation of alpha-thalassemia in Israel., American journal of hematology, 65(3), 196-203, 2000
Created on 2010-06-16 16:13:15,
Last reviewed on 2024-03-08 12:33:10 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2010-06-16 16:13:15 | The IthaGenes Curation Team | Created |
2 | 2013-10-15 17:28:32 | The IthaGenes Curation Team | Reviewed. |
3 | 2020-10-02 10:35:37 | The IthaGenes Curation Team | Reviewed. Comment added. Location corrected. |
4 | 2021-11-04 11:40:02 | The IthaGenes Curation Team | Reviewed. Common name corrected. HGVS name deleted. |
5 | 2024-03-08 12:33:10 | The IthaGenes Curation Team | Reviewed. Comment added, Variant type changed |
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IthaGenes was last updated on 2024-11-20 13:24:07