IthaID: 4060
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
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Common Name: | --AG | HGVS Name: | NC_000016.10:g.10001_(284537_284542)del |
Hb Name: | N/A | Protein Info: | N/A |
Also known as:
Comments: Large deletion of about 274 kb spanning from the telomeric region in 5′ the genes POLR3K, RHBDF1, MPG, NPRL3, all the α-globin gene cluster, LUC7L, FAM234A, and RGS11, to the exon 2 of the PDIA2 gene in the 3′. The deletion was identified in a family from Agrigento and was associated with α0-thalassemia and not the ATR-16 syndrome.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
No available links
Phenotype
Hemoglobinopathy Group: | Thalassaemia |
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Hemoglobinopathy Subgroup: | α-thalassaemia |
Allele Phenotype: | α0 |
Associated Phenotypes: | N/A |
Other details
Type of Mutation: | Deletion |
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Ethnic Origin: | Italian |
Molecular mechanism: | N/A |
Inheritance: | Recessive |
DNA Breakpoint Determined: | No |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
- Cardiero G, Musollino G, Prezioso R, Nigro V, Lacerra G, Alpha-Thalassemia in Southern Italy: Characterization of Five New Deletions Removing the Alpha-Globin Gene Cluster., Int J Mol Sci, 24(3), 0, 2023
Created on 2023-07-05 14:39:40,
Last reviewed on 2023-07-06 10:57:31 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2023-07-05 14:39:40 | The IthaGenes Curation Team | Created |
2 | 2023-07-05 14:40:58 | The IthaGenes Curation Team | Reviewed. |
3 | 2023-07-06 10:57:31 | The IthaGenes Curation Team | Reviewed. Comment update |
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IthaGenes was last updated on 2024-12-03 11:48:06