IthaID: 3750
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
---|---|---|---|
Common Name: | CD 115 GCC>ACC [Ala>Thr] | HGVS Name: | HBB:c.346G>A |
Hb Name: | N/A | Protein Info: | β 115(G17) Ala>Thr |
Context nucleotide sequence:
GGGCAACGTGCTGGTCTGTGTGCTG [G/A] CCCATCACTTTGGCAAAGAATTCAC (Strand: -)
Protein sequence:
MVHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLTHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
Also known as:
Comments: Found in compound heterozygosity with the CD 41/42 (-CTTT) [IthaID: 147] in a 56-year old Chinese male presented with mild anaemia, microcytosis and hypochromia.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
No available links
Phenotype
Hemoglobinopathy Group: | Thalassaemia |
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Hemoglobinopathy Subgroup: | β-thalassaemia |
Allele Phenotype: | N/A |
Associated Phenotypes: | N/A |
Location
Chromosome: | 11 |
---|---|
Locus: | NG_000007.3 |
Locus Location: | 71920 |
Size: | 1 bp |
Located at: | β |
Specific Location: | Exon 3 |
Other details
Type of Mutation: | Point-Mutation(Substitution) |
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Effect on Gene/Protein Function: | Missense codons (Protein Structure) |
Ethnic Origin: | Chinese |
Molecular mechanism: | N/A |
Inheritance: | Recessive |
DNA Sequence Determined: | Yes |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
To the best of our knowledge, this is unpublished data. Please use with caution!
Microattributions
A/A | Contributor(s) | Date | Comments |
---|---|---|---|
1 | Li, Youqiong | 2020-11-25 | First report. |
Created on 2021-02-25 15:35:49,
Last reviewed on 2022-09-15 14:57:05 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2021-02-25 15:35:49 | The IthaGenes Curation Team | Created |
2 | 2022-09-15 14:57:05 | The IthaGenes Curation Team | Reviewed. Comment edit. |
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IthaGenes was last updated on 2024-11-20 13:24:07