IthaID: 3393

Names and Sequences

Functionality: Globin gene causative mutation Pathogenicity: N/A
Common Name: 3.5 kb deletion HGVS Name: NC_000011.10:g.5224302_5227791del
Hb Name: N/A Protein Info: N/A
Also known as: Thai, 3485 bp deletion

We follow the HGVS sequence variant nomenclature and IUPAC standards.

Comments: The deletion spans approximately 3.5 kb within the β-globin gene cluster, removing both the β-globin gene promoter and the entire β-globin gene. Heterozygous carriers exhibit a mild anaemia phenotype, while co-inheritance with other β+/β0 mutations results in intermediate thalassemia, leading to moderate or severe transfusion-dependent anaemia, respectively.

External Links

Phenotype

Hemoglobinopathy Group: Thalassaemia
Hemoglobinopathy Subgroup: β-thalassaemia
Allele Phenotype:β0
Associated Phenotypes: Haemolytic anaemia [HP:0001878]
Ineffective erythropoiesis [HP:0010972]

Location

Chromosome: 11
Locus: NG_000007.3
Locus Location: 69825
Size: 3.5 kb
Deletion involves: β

Other details

Type of Mutation: Deletion
Ethnic Origin: Thai, Chinese
Molecular mechanism: N/A
Inheritance: Recessive
DNA Breakpoint Determined: Yes

In silico pathogenicity prediction

Publications / Origin

  1. Sanguansermsri T, Pape M, Laig M, Hundrieser J, Flatz G, Beta zero-thalassemia in a Thai family is caused by a 3.4 kb deletion including the entire beta-globin gene., Hemoglobin, 14(2), 157-68, 1990
  2. Lynch JR, Brown JM, Best S, Jennings MW, Weatherall DJ, Characterization of the breakpoint of a 3.5-kb deletion of the beta-globin gene., Genomics, 10(2), 509-11, 1991
  3. He S, Qin Q, Lin L, Zuo Y, Chen Q, Wei H, Zheng C, Chen B, Qiu X, First Identification of the 3.5 kb Deletion (NC_000011.10: g.5224302-5227791del3490bp) on the β-Globin Gene Cluster in a Chinese Family., Hemoglobin, 42(4), 272-275, 2018
  4. Yin ZZ, Yao J, Wei FX, Chen CY, Yan HM, Zhang M, Targeted Next-Generation Sequencing Reveals a Large Novel β-Thalassemia Deletion that Removes the Entire Gene., Hemoglobin, 2022
  5. Fan YH, Duan CL, Luo SL, Ge SJ, Yu CF, Xi JM, Chu JY, Yang ZQ, [Identification of Rare 3.5 kb Deletion in the β-Globin Gene Cluster]., Zhongguo Shi Yan Xue Ye Xue Za Zhi, 33(1), 175-179, 2025
Created on 2019-04-08 16:09:58, Last reviewed on 2025-03-12 08:32:43 (Show full history)

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