IthaID: 2517
Names and Sequences
Functionality: | Disease modifying mutation | Pathogenicity: | N/A |
---|---|---|---|
Common Name: | CD 328 CGC>-GC | HGVS Name: | NG_013087.1:g.7212delC |
Context nucleotide sequence:
ATTCGCGCGCTCGGACGAGCTGACC [C/-] GCCACTACCGGAAACACACGGGGCA (Strand: -)
Also known as:
Comments: Protein change: R328Afs. Found in individuals with borderline HbA2.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
No available links
Phenotype
Allele Phenotype (Cis): | N/A |
---|---|
Allele Phenotype (Trans): | N/A |
Associated Phenotypes: | Anaemia [HP:0001903] |
Location
Chromosome: | 19 |
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Locus: | NG_013087.1 |
Locus Location: | 7212 |
Size: | 1 bp |
Located at: | KLF1 |
Specific Location: | Exon 3 |
Other details
Type of Mutation: | Point-Mutation(Deletion) |
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Effect on Gene/Protein Function: | Frameshift (Translation) |
Ethnic Origin: | Chinese |
Molecular mechanism: | N/A |
Inheritance: | Quantitative trait |
DNA Sequence Determined: | Yes |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
- Lou JW, Li DZ, Zhang Y, He Y, Sun MN, Ye WL, Liu YH, Delineation of the molecular basis of borderline hemoglobin A2 in Chinese individuals., Blood Cells Mol. Dis. , 2014
Created on 2014-06-06 08:34:20,
Last reviewed on 2016-09-14 10:23:49 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2014-06-06 08:34:20 | The IthaGenes Curation Team | Created |
2 | 2014-06-06 09:02:17 | The IthaGenes Curation Team | Reviewed. Reference added. |
3 | 2014-06-12 10:39:02 | The IthaGenes Curation Team | Reviewed. Common name corrected. |
4 | 2016-09-14 10:20:29 | The IthaGenes Curation Team | Reviewed. Specific location and clinical phenotype added. |
5 | 2016-09-14 10:23:49 | The IthaGenes Curation Team | Reviewed. Comment updated. |
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IthaGenes was last updated on 2024-11-20 13:24:07