IthaID: 2498
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
---|---|---|---|
Common Name: | 86.7 kb (Αγδβ)0 Indian del | HGVS Name: | NC_000011.10:g.5164124_5250830delinsTG |
Hb Name: | N/A | Protein Info: | N/A |
Also known as: HPFH-10
Comments: The 5' breakpoint lies 4.3 kb downstream of Gγ-globin gene and the 3' breakpoint lies in L1 repeat sequence.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
No available links
Phenotype
Hemoglobinopathy Group: | HPFH |
---|---|
Hemoglobinopathy Subgroup: | HPFH |
Allele Phenotype: | Gγ(Aγδβ)0 HPFH |
Associated Phenotypes: | Hb F levels [HP:0011904] [OMIM:141749] |
Other details
Type of Mutation: | Deletion |
---|---|
Ethnic Origin: | Indian |
Molecular mechanism: | N/A |
Inheritance: | Recessive |
DNA Breakpoint Determined: | No |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
- Mayuranathan T, Rayabaram J, Das R, Arora N, Edison ES, Chandy M, Srivastava A, Velayudhan SR, Identification of rare and novel deletions that cause (δβ)(0) -thalassaemia and hereditary persistence of foetal haemoglobin in Indian population., Eur. J. Haematol. , 92(6), 514-20, 2014
Created on 2014-06-05 09:41:55,
Last reviewed on 2019-09-26 16:36:17 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2014-06-05 09:41:55 | The IthaGenes Curation Team | Created |
2 | 2019-09-26 16:36:17 | The IthaGenes Curation Team | Reviewed. Common name edited. Comment added. |
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IthaGenes was last updated on 2024-11-20 13:24:07