IthaID: 1547
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
---|---|---|---|
Common Name: | Dutch II | HGVS Name: | NC_000011.10:g.(?_4999945)_(5409809_5430440)del |
Hb Name: | N/A | Protein Info: | N/A |
Also known as:
Comments: The deletion length is estimated to be larger than 400 kb. The 5' breakpoint is located between positions 5408181 and 5387616, while the 3' breakpoint region is undefined (UCSC Genome Browser, May 2004).
We follow the HGVS sequence variant nomenclature and IUPAC standards.
External Links
No available links
Phenotype
Hemoglobinopathy Group: | Thalassaemia |
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Hemoglobinopathy Subgroup: | εγδβ-thalassaemia |
Allele Phenotype: | (εGγAγδβ)0 |
Associated Phenotypes: | N/A |
Other details
Type of Mutation: | Deletion |
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Ethnic Origin: | Dutch |
Molecular mechanism: | N/A |
Inheritance: | Recessive |
DNA Breakpoint Determined: | No |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
- Abels J, Michiels JJ, Giordano PC, Bernini LF, Baysal E, Smetanina NS, Kazanetz EG, Leonova JY, Huisman TH, A de novo deletion causing epsilon gamma delta beta-thalassemia in a Dutch patient., Acta haematologica, 96(2), 108-9, 1996
- Harteveld CL, Voskamp A, Phylipsen M, Akkermans N, den Dunnen JT, White SJ, Giordano PC, Nine unknown rearrangements in 16p13.3 and 11p15.4 causing alpha- and beta-thalassaemia characterised by high resolution multiplex ligation-dependent probe amplification., Journal of medical genetics, 42(12), 922-31, 2005
Created on 2010-06-16 16:13:17,
Last reviewed on 2018-01-15 17:26:20 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2010-06-16 16:13:17 | The IthaGenes Curation Team | Created |
2 | 2013-10-15 17:28:32 | The IthaGenes Curation Team | Reviewed. |
3 | 2018-01-09 17:38:40 | The IthaGenes Curation Team | Reviewed. Mutation comment added. Location details added. Reference added. |
4 | 2018-01-10 17:40:48 | The IthaGenes Curation Team | Reviewed. Deletion breakpoint determined. |
5 | 2018-01-10 17:51:00 | The IthaGenes Curation Team | Reviewed. Deletion breakpoints corrected. |
6 | 2018-01-10 18:08:39 | The IthaGenes Curation Team | Reviewed. |
7 | 2018-01-15 17:26:20 | The IthaGenes Curation Team | Reviewed. Mutation comment added. |
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IthaGenes was last updated on 2024-11-20 13:24:07