IthaID: 1508
Names and Sequences
Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
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Common Name: | Japanese (δβ)0 | HGVS Name: | NC_000011.10:g.5132468_5246133del |
Hb Name: | N/A | Protein Info: | N/A |
Also known as:
Comments: Deletion of 113666 nts from the Agamma gene to beta gene.
We follow the HGVS sequence variant nomenclature and IUPAC standards.
Phenotype
Hemoglobinopathy Group: | Thalassaemia |
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Hemoglobinopathy Subgroup: | δβ-thalassaemia |
Allele Phenotype: | GγAγ(δβ)0 |
Associated Phenotypes: | N/A |
Location
Chromosome: | 11 |
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Locus: | NG_000007.3 |
Locus Location: | 51483 |
Size: | 113.666 kb |
Deletion involves: | δ, β, pseudo β |
Other details
Type of Mutation: | Deletion |
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Ethnic Origin: | Japan |
Molecular mechanism: | N/A |
Inheritance: | Recessive |
DNA Breakpoint Determined: | Yes |
In silico pathogenicity prediction
Note:
The impact thresholds provided in this section are based on the analyses performed in Tamana et.al. For any given tool, the impact thresholds defined for the set of variants with the same effect on function as the variant examined, are preferred over those defined for the full dataset.
Publications / Origin
- Matsunaga E, Kimura A, Yamada H, Fukumaki Y, Takagi Y, A novel deletion in delta beta-thalassemia found in Japan., Biochemical and biophysical research communications, 126(1), 185-91, 1985
Created on 2010-06-16 16:13:17,
Last reviewed on 2021-03-16 16:12:56 (Show full history)
A/A | Date | Curator(s) | Comments |
---|---|---|---|
1 | 2010-06-16 16:13:17 | The IthaGenes Curation Team | Created |
2 | 2013-10-15 17:28:32 | The IthaGenes Curation Team | Reviewed. |
3 | 2021-03-16 16:12:56 | The IthaGenes Curation Team | Reviewed. HGVS name corrected. |
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IthaGenes was last updated on 2024-10-29 15:59:14